The detailed information of tRNA gene sequence


Sequence ID>WENV170723042
Genome IDLSQX01252826
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 18458
End posion on genome 18534
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggagccacaa
tRNA gene sequence 
GGGCTTTTAGCTCAGTTGGTTAGAGCAACCGGCTCATAACCGGTAGGTCCGGGGTTCGAG
TCCCTGAAGGCCCACCA
Downstream region at tRNA end position 
cagaaaataa
Secondary structure (Cloverleaf model)
>WENV170723042	Met	CAT
                   a      ACCA cagaaaataa
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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