The detailed information of tRNA gene sequence


Sequence ID>WENV170723217
Genome IDLSQX01259157
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 23424
End posion on genome 23497
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
ccgaccattt
tRNA gene sequence 
GCAGGTATAGTTTAATGGTAGAACATCAGCCTTCCAAGCTGAATGTGCGAGTTCGATTCT
CGTTACCTGCTCCA
Downstream region at tRNA end position 
attgaaattt
Secondary structure (Cloverleaf model)
>WENV170723217	Gly	TCC
                   t      TCCA attgaaattt
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     T - A
                     A - T          T T
                    T     T G C T C     A
        A A        A      + | | | |     G
      T     T T T G       G C G A G     C
      G     + | | |                 T T
      G     G A A C
        T A        A     ATGT
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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