The detailed information of tRNA gene sequence


Sequence ID>WENV170723250
Genome IDLSQX01261192
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 5012
End posion on genome 5086
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ctcagcaccc
tRNA gene sequence 
GGGCGGTTAACTCAGCGGGAGAGTGCTACCTTCACACGGTAGAAGTCGCTGGTTCAATCC
CAGCACCGCCTACCA
Downstream region at tRNA end position 
tgaaaatcag
Secondary structure (Cloverleaf model)
>WENV170723250	Val	CAC
                   c      ACCA tgaaaatcag
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C T
                    T     C G A C C     A
        G A        A      | | | | |     A
      C     C T C A       G C T G G     C
      G     | | | |                 T T
      G     G A G T
        G A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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