The detailed information of tRNA gene sequence


Sequence ID>WENV170723251
Genome IDLSQX01261192
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 9450
End posion on genome 9526
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tggattgcaa
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCAGAGGTTCAAA
TCCTCTCCCCGCTACCA
Downstream region at tRNA end position 
ataaaaacaa
Secondary structure (Cloverleaf model)
>WENV170723251	Met	CAT
                   a      ACCA ataaaaacaa
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C T C C     A
      T G A        G      | | | | |     A
    C       C G A G       A G A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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