The detailed information of tRNA gene sequence


Sequence ID>WENV170723272
Genome IDLSQX01262764
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 176
End posion on genome 84
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agcaccaccc
tRNA gene sequence 
GGAGACTTGCCCGAGAGGCCGAAGGGGCTCCCCTGCTAAGGGAGTATGGGGTCAAAAGCT
CCATCGAGGGTTCGAATCCCTCACTCTCCGCCA
Downstream region at tRNA end position 
gttacaccgg
Secondary structure (Cloverleaf model)
>WENV170723272	Ser	GCT
                   c      GCCA gttacaccgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C   C
                     T - A          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      C G A        G     TATGGGGTCAAAAGCTCCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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