The detailed information of tRNA gene sequence


Sequence ID>WENV170723333
Genome IDLSQX01264786
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 12097
End posion on genome 12172
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
aattacgaag
tRNA gene sequence 
GGCCCCATCGTCTAGTGGTCTAGGACCCAGGGTTCTCAGTCCTGTAACACGGGTTCGAAT
CCCGTTGGGGCTACCA
Downstream region at tRNA end position 
aaaatagcga
Secondary structure (Cloverleaf model)
>WENV170723333	Glu	CTC
                   g      ACCA aaaatagcga
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      C T A        C     TAAC
                    C - G
                    A - T
                    G - C
                    G - C
                    G + T
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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