The detailed information of tRNA gene sequence


Sequence ID>WENV170723441
Genome IDLSQX01268200
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 5560
End posion on genome 5486
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tttattataT
tRNA gene sequence 
GGGAGCTTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGGGGTCATAGGTTCGAGC
CCTATAGCTCCCATta
Downstream region at tRNA end position 
atatacggca
Secondary structure (Cloverleaf model)
>WENV170723441	Val	TAC
                   T      ATta atatacggca
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A          C G
                    T     T A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T + G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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