The detailed information of tRNA gene sequence


Sequence ID>WENV170723483
Genome IDLSQX01269958
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 11
End posion on genome 84
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cattttttta
tRNA gene sequence 
GGCGACATAGCCAAGTGGTAAGGCAGAGGACTGCAAATCCTTTATCCCCGGTTCGAATCC
GGGTGTCGCCTCCA
Downstream region at tRNA end position 
tttttttttg
Secondary structure (Cloverleaf model)
>WENV170723483	Cys	GCA
                   a      TCCA tttttttttg
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     G G G C C     A
        G A        A      | | | | |     G
      T     A C C G       C C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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