The detailed information of tRNA gene sequence


Sequence ID>WENV170723512
Genome IDLSQX01271635
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 3443
End posion on genome 3371
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
aacagattcc
tRNA gene sequence 
GGCCCATTCGTCTATCGGTTAGGACGCAAGATTCTCATTCTTGAAAGAGGAGTTCGATTC
TCCTATGGGCTACtt
Downstream region at tRNA end position 
ctaatacatg
Secondary structure (Cloverleaf model)
>WENV170723512	Glu	CTC
                   c      ACtt ctaatacatg
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T T
                    T     T C C T C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G A G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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