The detailed information of tRNA gene sequence


Sequence ID>WENV170723534
Genome IDLSQX01272262
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2528
End posion on genome 2453
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cagcgaacac
tRNA gene sequence 
GCCCCGTTCGTCTAGCGGCCTAGGACGCCGGCCTCTCACGCCGGTAACACGGGTTCAAAT
CCCGTACGGGGTACCA
Downstream region at tRNA end position 
gacagcgaga
Secondary structure (Cloverleaf model)
>WENV170723534	Glu	CTC
                   c      ACCA gacagcgaga
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T G C C C     A
      C G A        C      | | | | |     A
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        G     TAAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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