The detailed information of tRNA gene sequence


Sequence ID>WENV170723577
Genome IDLSQX01273907
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 11472
End posion on genome 11548
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
attttttgat
tRNA gene sequence 
CGGGACGTGGCGCAGTTTGGTAGCGCGTTTGAATGGGGTTCAAAAGGTCGCAAGTTCGAA
TCTTGTCGTCCCGACCA
Downstream region at tRNA end position 
tttttatttg
Secondary structure (Cloverleaf model)
>WENV170723577	Pro	GGG
                   t      ACCA tttttatttg
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G T T C     A
      T G A        G      + | | | |     G
    T       C G C G       G C A A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    T - A
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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