The detailed information of tRNA gene sequence


Sequence ID>WENV170723622
Genome IDLSQX01275574
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2507
End posion on genome 2432
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ccccctcttt
tRNA gene sequence 
GGTCGATTAGCTCAGTTGGTAGAGCGCTACCCTTACAAGGTAGATGTCATAAGTTCGAGT
CTTATATCGACCACCA
Downstream region at tRNA end position 
tttcttaaaa
Secondary structure (Cloverleaf model)
>WENV170723622	Val	TAC
                   t      ACCA tttcttaaaa
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     T A T T C     A
      T G A        A      | | | | |     G
    T       C T C G       A T A A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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