The detailed information of tRNA gene sequence


Sequence ID>WENV170723700
Genome IDLSQX01278600
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1420
End posion on genome 1330
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaattcatac
tRNA gene sequence 
GGAGAGATGGTCGAGTTGGTTTAAGGCACCGGTCTTGAAAACCGGCGTAGGGGTGACCCT
ACCTAGGGTTCGAATCCCTATCTCTCCGCCA
Downstream region at tRNA end position 
cacggagaag
Secondary structure (Cloverleaf model)
>WENV170723700	Ser	TGA
                   c      GCCA cacggagaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     A T C C C     A
    T T G A        G      | | | | |     G
  G         G C T G       T A G G G     C
  G           | + |                 T T
  T         A G G C
    T T A          A     CGTAGGGGTGACCCTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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