The detailed information of tRNA gene sequence


Sequence ID>WENV170723800
Genome IDLSQX01281999
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 4444
End posion on genome 4518
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ataaaatcct
tRNA gene sequence 
GGTCCGGTAGTTCAGTTGGTTAGAATACATGCCTGTCACGCATGGGGTCGCGAGTTCGAG
TCTCGTCCGGACCGCtt
Downstream region at tRNA end position 
aaggttgatc
Secondary structure (Cloverleaf model)
>WENV170723800	Asp	GTC
                   t      GCtt aaggttgatc
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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