The detailed information of tRNA gene sequence


Sequence ID>WENV170723806
Genome IDLSQX01282197
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 18963
End posion on genome 18889
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tgaccagcgc
tRNA gene sequence 
GGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTC
CCCTATGGGTCACCA
Downstream region at tRNA end position 
ctgaagcagg
Secondary structure (Cloverleaf model)
>WENV170723806	Glu	TTC
                   c      ACCA ctgaagcagg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     T C C C C     A
      C G A        G      | | | | |     G
    G       A C T G       A G G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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