The detailed information of tRNA gene sequence


Sequence ID>PHG0100232
Genome IDAY190604
Search identical group
Phylum/Classunclassified archaeal dsDNA viruses
SpeciesHalovirus HF1 PaP3 (AY190604)
Start position on genome 72927
End posion on genome 72856
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cgctgatttt
tRNA gene sequence 
GAGACAGTAGTGTAGTGGTATCATCGGGCGTTTGGGACGCTCTTACGCCGGTTCGACTCC
GGCCTGTCTCACtc
Downstream region at tRNA end position 
taagaccctc
Secondary structure (Cloverleaf model)
>PHG0100232	Pro	TGG
                   t      ACtc taagaccctc
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C          T C
                    T     C G G C C     A
        G A        A      | | | | |     G
      T     T G T G       G C C G G     C
      G       | | +                 T T
      G     T C A T
        T A        C     TTAC
                    G - C
                    G + T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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