The detailed information of tRNA gene sequence


Sequence ID>WENV170723884
Genome IDLSQX01284083
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1077
End posion on genome 1153
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gctccaattt
tRNA gene sequence 
GTGCCTGTAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTGGGCCGGGGGTTCGAA
TCCCTCCGGGGACGCCA
Downstream region at tRNA end position 
ttgtggtggg
Secondary structure (Cloverleaf model)
>WENV170723884	Arg	TCT
                   t      GCCA ttgtggtggg
                     G - C
                     T - A
                     G   G
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGCC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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