The detailed information of tRNA gene sequence


Sequence ID>WENV170723996
Genome IDLSQX01288633
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 6333
End posion on genome 6245
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggtacgccaT
tRNA gene sequence 
GGAGAGATGCCTGAGCGGTCGAAAGGACACGCTTGGAGAGCGTGCGTATGAGAAATCGTA
CCGTGGGTTCGAATCCCACTCTCTCCGTag
Downstream region at tRNA end position 
ttatatttat
Secondary structure (Cloverleaf model)
>WENV170723996	Ser	GGA
                   T      GTag ttatatttat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C C       G T G G G     C
    G         | | |                 T T
    T       A A G G
      C G A        A     CGTATGAGAAATCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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