The detailed information of tRNA gene sequence


Sequence ID>WENV170724041
Genome IDLSQX01290494
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 5947
End posion on genome 6035
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggcttttact
tRNA gene sequence 
GGAGAAATACCCAAGAGGCTGAAGGGGTCGGTCTCGAAAACCGATAGGAGTGCAAGCTCG
CGAGGGTTCAAATCCCTCTTTCTCCGCCA
Downstream region at tRNA end position 
acgtcaatta
Secondary structure (Cloverleaf model)
>WENV170724041	Ser	CGA
                   t      GCCA acgtcaatta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      A G A        A      | | | | |     A
    G       A C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TAGGAGTGCAAGCTCGC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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