The detailed information of tRNA gene sequence


Sequence ID>WENV170724043
Genome IDLSQX01290620
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 19666
End posion on genome 19590
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccgtaaacat
tRNA gene sequence 
GGCGGCGTAGCTCAGTTGGCTATAGCATGCGGTTCATACCCGCAGTGTCGTTGGTTCAAG
TCCAACTACCGCTACCA
Downstream region at tRNA end position 
ccgcgctccc
Secondary structure (Cloverleaf model)
>WENV170724043	Met	CAT
                   t      ACCA ccgcgctccc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C   A
                     G + T          T G
                    T     C A A C C     A
      T G A        A      | | | | |     A
    T       C T C G       G T T G G     C
    G         | | |                 T T
    G       T A G C
      C T A        A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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