The detailed information of tRNA gene sequence


Sequence ID>WENV170724146
Genome IDLSQX01295295
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 17605
End posion on genome 17529
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ttttatatat
tRNA gene sequence 
GCGTCCTTAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTAGGTCATACGTTCGAA
TCGTATAGGGCGTACCA
Downstream region at tRNA end position 
ctaatatgcg
Secondary structure (Cloverleaf model)
>WENV170724146	Arg	TCT
                   t      ACCA ctaatatgcg
                     G + T
                     C - G
                     G - C
                     T + G
                     C - G
                     C - G
                     T - A          T A
                    T     T A T G C     A
      C G A        A      | | | | |     G
    T       C T C G       A T A C G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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