The detailed information of tRNA gene sequence


Sequence ID>WENV170724230
Genome IDLSQX01297876
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 131
End posion on genome 207
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tcaccaacac
tRNA gene sequence 
GGCCCGGTAGTTCAGTCGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCGAGGGTTCGAG
TCCCTTCCGGGTCGCCA
Downstream region at tRNA end position 
tttttttaaa
Secondary structure (Cloverleaf model)
>WENV170724230	Asp	GTC
                   c      GCCA tttttttaaa
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    C       C T T G       G A G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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