The detailed information of tRNA gene sequence


Sequence ID>WENV170724273
Genome IDLSQX01299107
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 15746
End posion on genome 15822
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aagtacatat
tRNA gene sequence 
GGCGGCGTAGCTCAGCTGGTTAGAGCATACGGCTCATATCCGTAGTGTCCGGGGTTCAAT
TCCCTGCACCGCCACCA
Downstream region at tRNA end position 
gcatacaagc
Secondary structure (Cloverleaf model)
>WENV170724273	Met	CAT
                   t      ACCA gcatacaagc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C   A
                     G - C          T T
                    T     G T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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