The detailed information of tRNA gene sequence


Sequence ID>WENV170724372
Genome IDLSQX01302723
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 11186
End posion on genome 11261
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
cgccaccaac
tRNA gene sequence 
GCCCACGTAGCTCAGTAGGCAGAGCGTCGCCTTGGTAAGGCGGAGGTCACCGGTTCAATC
CCGGTCGTGGGCTCCA
Downstream region at tRNA end position 
tttttatata
Secondary structure (Cloverleaf model)
>WENV170724372	Thr	GGT
                   c      TCCA tttttatata
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C          C T
                    T     T G G C C     A
      T G A        A      | | | | |     A
    A       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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