The detailed information of tRNA gene sequence


Sequence ID>WENV170724416
Genome IDLSQX01304904
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 22353
End posion on genome 22429
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gaaaaatttt
tRNA gene sequence 
GGGGGTTTAGCTCATCTGGCTAGAGCGCAACACTGGCAGTGTTGAGGTGACCGGTTCGAG
TCCGGTAATCTCCACGA
Downstream region at tRNA end position 
attaatctac
Secondary structure (Cloverleaf model)
>WENV170724416	Ala	GGC
                   t      ACGA attaatctac
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     T - A          T G
                    T     T G G C C     A
      C T A        A      | | | | |     G
    T       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTG
                    C - G
                    A - T
                    A - T
                    C - G
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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