The detailed information of tRNA gene sequence


Sequence ID>WENV170724427
Genome IDLSQX01305266
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 35405
End posion on genome 35479
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
tagagcagat
tRNA gene sequence 
GCCCCTGTAGCTCAGACTGGGAGAGCGCCAGACTGAAGATCTGGTTGTCCCCGGTTCAAA
TCCGGGCGGGGGCACtt
Downstream region at tRNA end position 
ccgagcagct
Secondary structure (Cloverleaf model)
>WENV170724427	Phe	GAA
                   t      ACtt ccgagcagct
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     G G G C C     A
      A G A        A      | | | | |     A
    C       C T C G       C C C G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        G     TTGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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