The detailed information of tRNA gene sequence


Sequence ID>WENV170724474
Genome IDLSQX01306658
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 7267
End posion on genome 7193
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cgctctacaa
tRNA gene sequence 
GGCCCATTCGTCTATCGGTTAGGACGCCAGATTTTCATTCTGGAAAGAGGGGTTCGATTC
CCCTATGGGCTACCA
Downstream region at tRNA end position 
ataataacag
Secondary structure (Cloverleaf model)
>WENV170724474	Glu	TTC
                   a      ACCA ataataacag
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T T
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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