The detailed information of tRNA gene sequence


Sequence ID>WENV170724534
Genome IDLSQX01308862
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1453
End posion on genome 1367
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
gccgcgcagt
tRNA gene sequence 
GCCGAAGTGGCGGAATTGGTAGACGCGCTAGGTTCAGGGTCTAGTTGGGGTTCCCCAGTG
GAAGTTCGAGTCTTCTCTTCGGCACCA
Downstream region at tRNA end position 
ttttaagaga
Secondary structure (Cloverleaf model)
>WENV170724534	Leu	CAG
                   t      ACCA ttttaagaga
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     T C T T C     A
      T A A        G      + | | | |     G
    T       G G C G       G G A A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TTGGGGTTCCCCAGT
                    C - G
                    T - A
                    A - T
                    G - C
                    G + T
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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