The detailed information of tRNA gene sequence


Sequence ID>WENV170724620
Genome IDLSQX01312468
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 209
End posion on genome 133
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cccaccaaat
tRNA gene sequence 
GGCCCGGTAGTTCAGTTGGTTAGAACGCTAGCCTGTCACGCTAGAGGCCGACGGTTCGAG
TCCGTTCCGGGTCGCCA
Downstream region at tRNA end position 
aacctgcctc
Secondary structure (Cloverleaf model)
>WENV170724620	Asp	GTC
                   t      GCCA aacctgcctc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T T G C C     A
      T G A        A      + | | | |     G
    T       C T T G       G A C G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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