The detailed information of tRNA gene sequence


Sequence ID>WENV170724694
Genome IDLSQX01315195
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 5481
End posion on genome 5410
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gcaacgccac
tRNA gene sequence 
GGTGGAATGGCCGAGTGGTGAGGCAACGGTCTGCAAAACCGTGCACACGGGTTCGATTCC
CGTTTCCACCTCtg
Downstream region at tRNA end position 
gttagatcct
Secondary structure (Cloverleaf model)
>WENV170724694	Cys	GCA
                   c      TCtg gttagatcct
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     A - T
                     A - T          T T
                    T     T G C C C     A
        G A        G      | | | | |     G
      T     G C C G       A C G G G     C
      G       | | |                 T T
      G     A G G C
        T G        A     GCAC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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