The detailed information of tRNA gene sequence


Sequence ID>WENV170724758
Genome IDLSQX01317587
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2869
End posion on genome 2795
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tgggagacaa
tRNA gene sequence 
GGGTGCGTAGCTCAGGTGGAGAGCGCTTTACTCACATTCAAGAGGTCGCAGGTTCGATCC
CTGCCGCGCCCACCA
Downstream region at tRNA end position 
gtaatagcaa
Secondary structure (Cloverleaf model)
>WENV170724758	Val	CAC
                   a      ACCA gtaatagcaa
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     C - G
                     G - C          C T
                    T     C G T C C     A
        G A        A      | | | | |     G
      G     C T C G       G C A G G     C
      T     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    T   C
                    A - T
                  C       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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