The detailed information of tRNA gene sequence


Sequence ID>WENV170724764
Genome IDLSQX01318366
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1379
End posion on genome 1452
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gcgtgtgtat
tRNA gene sequence 
GCTGCTATAGTGTAGGGGCCAATCATGTCGGCCTTTCACGCCGACGACTGGGGTTCGAAT
CCCCATAGCAGCACtc
Downstream region at tRNA end position 
tgttttttag
Secondary structure (Cloverleaf model)
>WENV170724764	Glu	TTC
                   t      ACtc tgttttttag
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     A C C C C     A
      G G A        A      | | | | |     G
    G       T G T G       T G G G G     C
    G         | | +                 T T
    C       T C A T
      C A A        G     CGAC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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