The detailed information of tRNA gene sequence


Sequence ID>WENV170724821
Genome IDLSQX01319832
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 4094
End posion on genome 4183
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgccggccgt
tRNA gene sequence 
GGAGGGATGGCAGAGCGGTTGAATGCACCGGTCTTGAAAACCGGCAAGGGTTAACGCCCT
TCCAGGGTTCGAATCCCTGTCCCTCCGCCA
Downstream region at tRNA end position 
ctaacgcatc
Secondary structure (Cloverleaf model)
>WENV170724821	Ser	TGA
                   t      GCCA ctaacgcatc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G A C G       C A G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CAAGGGTTAACGCCCTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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