The detailed information of tRNA gene sequence


Sequence ID>WENV170724924
Genome IDLSQX01323960
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 54856
End posion on genome 54939
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ctcgcgtcac
tRNA gene sequence 
GGCAGGTTGCCCGAGCGGCCAATGGGAGCGGACTGTAAATCCGTCGGCTATCGCCTTCGC
AGGTTCGAATCCTGCACCTGCCACgt
Downstream region at tRNA end position 
cagccccgga
Secondary structure (Cloverleaf model)
>WENV170724924	Tyr	GTA
                   c      ACgt cagccccgga
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     C G T C C     A
      C G A        G      | | | | |     G
    G       G C C C       G C A G G     C
    G       + | | |                 T T
    C       T G G G
      C A A        A     CGGCTATCGCCTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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