The detailed information of tRNA gene sequence


Sequence ID>WENV170724976
Genome IDLSQX01326054
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 4586
End posion on genome 4496
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgtcataaac
tRNA gene sequence 
GGAGTAGTACTCAAGAGGCTGAAGAGGTGCCCCTGCTAAGGGCATAGGTCGGGAAACCGG
CGCAGGGGTTCAAATCCCCTCTACTCCGCCA
Downstream region at tRNA end position 
gttggcccgt
Secondary structure (Cloverleaf model)
>WENV170724976	Ser	GCT
                   c      GCCA gttggcccgt
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     G - C          T A
                    T     T C C C C     A
      A G A        A      | | | | |     A
    G       A C T C       A G G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGGGAAACCGGCGC
                    T - A
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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