The detailed information of tRNA gene sequence


Sequence ID>WENV170724977
Genome IDLSQX01326054
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 4492
End posion on genome 4416
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tccgccagtt
tRNA gene sequence 
GGCCCGTTGGAGAAGCGGTTTAACTCACATGCCTTTCACGCATGCATGCACGGGTTCGAA
TCCCGTACGGGTCACCA
Downstream region at tRNA end position 
atattgcaaa
Secondary structure (Cloverleaf model)
>WENV170724977	Glu	TTC
                   t      ACCA atattgcaaa
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T G C C C     A
      C G A        G      | | | | |     G
    G       A G A G       A C G G G     C
    G         | | |                 T T
    T       A C T C
      T T A        A     CATGC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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