The detailed information of tRNA gene sequence


Sequence ID>WENV170725060
Genome IDLSQX01329262
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 53925
End posion on genome 54001
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
aatttggagt
tRNA gene sequence 
CGGGACGTAGCGCAGCCTGGTAGCGCACACGCTTGGGGTGCGTGTGGTCGGTGGTTCAAA
TCCACTCGTCCCGACCA
Downstream region at tRNA end position 
tttctgtttt
Secondary structure (Cloverleaf model)
>WENV170725060	Pro	GGG
                   t      ACCA tttctgtttt
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C A C C     A
      C G A        A      + | | | |     A
    C       C G C G       G G T G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     TGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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