The detailed information of tRNA gene sequence


Sequence ID>WENV170725071
Genome IDLSQX01329449
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 3944
End posion on genome 4036
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggcatcaccc
tRNA gene sequence 
GGAGAGTTGCCCGAGAGGCCGAAGGGGCTCCCCTGCTAAGGGAGTATGGGGTCAAAAGCT
CCATCGAGGGTTCGAATCCCTCACTCTCCGCCA
Downstream region at tRNA end position 
gtttcctagc
Secondary structure (Cloverleaf model)
>WENV170725071	Ser	GCT
                   c      GCCA gtttcctagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      C G A        G     TATGGGGTCAAAAGCTCCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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