The detailed information of tRNA gene sequence


Sequence ID>WENV170725125
Genome IDLSQX01331033
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1211
End posion on genome 1135
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
atcttgtgat
tRNA gene sequence 
GGGCCGATAGCTCAGTTGGTTAGAGCACACGGCTGATAACCGTGAGGTCAGAGGTTCGAC
TCCTCTTCGGCCCACCA
Downstream region at tRNA end position 
tttttatggg
Secondary structure (Cloverleaf model)
>WENV170725125	Ile	GAT
                   t      ACCA tttttatggg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T          T C
                    T     T C T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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