The detailed information of tRNA gene sequence


Sequence ID>WENV170725236
Genome IDLSQX01335775
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1017
End posion on genome 1092
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gcgcgcctgt
tRNA gene sequence 
GGGGCCGTAGCTCAGTTGGTAGAGCGCATCGTTCGCAATGATGAGGTCAGGGGTTCGATT
CCCCTCGGCTCCACCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170725236	Ala	CGC
                   t      ACCA nnnnnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          T T
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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