The detailed information of tRNA gene sequence


Sequence ID>WENV170725261
Genome IDLSQX01336615
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2516
End posion on genome 2591
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttctttatac
tRNA gene sequence 
AGGGGTATAGCTCAGCTGGTAGAGCAGCGGTCTCCAAAACCGCGTGCCGTGGGTTCGAGT
CCTACTACCCCTGCCA
Downstream region at tRNA end position 
aagaaacggg
Secondary structure (Cloverleaf model)
>WENV170725261	Trp	CCA
                   c      GCCA aagaaacggg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T G
                    T     C A T C C     A
      C G A        A      | | + | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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