The detailed information of tRNA gene sequence


Sequence ID>WENV170725279
Genome IDLSQX01337062
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2599
End posion on genome 2523
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gttcaagtgc
tRNA gene sequence 
GGAGCGGTAGTTCAGTTGGTTAGAATGCTGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCCGCTCCGCCA
Downstream region at tRNA end position 
ctcaaacaag
Secondary structure (Cloverleaf model)
>WENV170725279	Asp	GTC
                   c      GCCA ctcaaacaag
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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