The detailed information of tRNA gene sequence


Sequence ID>WENV170725326
Genome IDLSQX01339063
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 12720
End posion on genome 12793
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ttgttttttt
tRNA gene sequence 
GCCCTTGTAGCTCAGTCGGTAGAGCACCACCATGGTAAGGTGGGGGTCATCGGTTCAAAT
CCGATCGAGGGCTCtg
Downstream region at tRNA end position 
tttttcttat
Secondary structure (Cloverleaf model)
>WENV170725326	Thr	GGT
                   t      TCtg tttttcttat
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     T + G
                     G - C          T A
                    T     T A G C C     A
      T G A        A      | | | | |     A
    C       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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