The detailed information of tRNA gene sequence


Sequence ID>WENV170725404
Genome IDLSQX01341610
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 106
End posion on genome 31
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
cggacagcaa
tRNA gene sequence 
GCGCCCGTAGCTCAACGGATAGAGCATCTGACTACGGATCAGAAGGTTGGGGGTTCGAAT
CCCTCCGGGCGCACCA
Downstream region at tRNA end position 
ttgtcaatcc
Secondary structure (Cloverleaf model)
>WENV170725404	Arg	ACG
                   a      ACCA ttgtcaatcc
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C A A        A      | + | | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     AGGTT
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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