The detailed information of tRNA gene sequence


Sequence ID>WENV170725412
Genome IDLSQX01341904
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 5189
End posion on genome 5261
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
ttacgcaaga
tRNA gene sequence 
GCCTTTATAGCTCAGTCGGGAGAGCGCCAGACTGAAGATCTGGTTGTCGCCGGTTCAATT
CCGGCTGAAGGCAtta
Downstream region at tRNA end position 
cattgtcctt
Secondary structure (Cloverleaf model)
>WENV170725412	Phe	GAA
                   a      Atta cattgtcctt
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A
                     T + G
                     A - T          T T
                    T     C G G C C     A
      T G A        A      | | | | |     A
    C       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     TTGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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