The detailed information of tRNA gene sequence


Sequence ID>WENV170725595
Genome IDLSQX01348856
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1475
End posion on genome 1561
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctgattctgT
tRNA gene sequence 
GCCGAGGTAGTCTAGTCCGGGAAGGCGGTGGCCTCGAAAGCCACTGGTGTTCGGCACCTC
GGGAGTTCAAATCTCCCCCTCGGCGTtt
Downstream region at tRNA end position 
tacaaaaaat
Secondary structure (Cloverleaf model)
>WENV170725595	Ser	CGA
                   T      GTtt tacaaaaaat
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    C       | | + |                 T T
    G       A G G C
      G G A        G     TGGTGTTCGGCACCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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