The detailed information of tRNA gene sequence


Sequence ID>WENV170725690
Genome IDLSQX01352387
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1730
End posion on genome 1656
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tagttatttt
tRNA gene sequence 
GGGCTTGTAGCCTAGTCTGGAAGGGCGTAAGACTCCTAATCTTAAGATCGAGGGTTCAAA
TCCCTCCAAGTCCGCtt
Downstream region at tRNA end position 
taaaaattat
Secondary structure (Cloverleaf model)
>WENV170725690	Arg	CCT
                   t      GCtt taaaaattat
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     T - A
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     A
    C       T C C G       G A G G G     C
    T       + | | |                 T T
    G       G G G C
      G A A        G     AGATC
                    T - A
                    A - T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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