The detailed information of tRNA gene sequence


Sequence ID>WENV170725756
Genome IDLSQX01355291
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1791
End posion on genome 1719
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaatccatag
tRNA gene sequence 
GGGCCGGTGGTCTAGGGGTATGATACCTCGCTCACAACGAGGTGGTCACGAGTTCGAATC
TCGTCCGGCCCACtg
Downstream region at tRNA end position 
gaccttttat
Secondary structure (Cloverleaf model)
>WENV170725756	Val	CAC
                   g      ACtg gaccttttat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T G C T C     A
        G A        G      | | | | |     G
      G     T C T G       A C G A G     C
      G       | | +                 T T
      G     T G A T
        T A        A     TGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  C       A
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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