The detailed information of tRNA gene sequence


Sequence ID>WENV170725782
Genome IDLSQX01356298
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 42451
End posion on genome 42526
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
agccggataa
tRNA gene sequence 
GGGGCTATAGCTCAGTTGGTAGAGCGTCGCGTTCGCAACGCGAAGGTCAGGGGTTCGATT
CCCCTTAGCTCCACAA
Downstream region at tRNA end position 
agcgttcagg
Secondary structure (Cloverleaf model)
>WENV170725782	Ala	CGC
                   a      ACAA agcgttcagg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T T
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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