The detailed information of tRNA gene sequence


Sequence ID>WENV170725793
Genome IDLSQX01356589
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 16260
End posion on genome 16186
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acagtccaga
tRNA gene sequence 
AGCGAGGTGGGGTAGTCAGGAAATCCCGGCGGGCTCATAACCCGTAGACCGATGGTTCAA
ATCCATCCCTCGCTAtga
Downstream region at tRNA end position 
gaaaaattct
Secondary structure (Cloverleaf model)
>WENV170725793	Met	CAT
                   a      Atga gaaaaattct
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T A C C     A
    C T G A        G      | | | | |     A
  A         T G G G       G A T G G     C
  G           | | |                 T T
  G         T C C C
    A A A          G     AGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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